BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB023B09LP1|AL428009
(1057 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1148 1591 0.0
>3x_Contig1148
Length = 4745
Score = 1591 bits (801), Expect = 0.0
Identities = 833/839 (99%), Gaps = 4/839 (0%)
Strand = Plus / Plus
Query: 148 tgtgtacaatatagaaactccgaatacatttctgaatcaagaaaagataatagttttctg 207
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tgtgtacaatatagaa-ctccgaatacatttctgaatcaagaaaagataatagttttctg 60
Query: 208 tcatttagcgagtgaaagttaatcattgcaaaccggaccgttttgaaccatttgcttatt 267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcatttagcgagtgaaagttaatcattgcaaaccggaccgttttgaaccatttgcttatt 120
Query: 268 agtattttcatctttcaaggcagagatcatgtcattcgaagctgaatcctcgttgacgtt 327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agtattttcatctttcaaggcagagatcatgtcattcgaagctgaatcctcgttgacgtt 180
Query: 328 aagtgatattcctttgaatattcaaaggaataataatatacatcatcatggtaacagtaa 387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aagtgatattcctttgaatattcaaaggaataataatatacatcatcatggtaacagtaa 240
Query: 388 atactcgcttgtgaaaggtttgatgggtaag-actgttaagaatgaaaggtgtaattcca 446
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 241 atactcgcttgtgaaaggtttgatgggtaagcactgttaagaatgaaaggtgtaattcca 300
Query: 447 agaaggaggaagagaataccgctgaacaaagtgatgatgatgaagatgacgaaaataata 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agaaggaggaagagaataccgctgaacaaagtgatgatgatgaagatgacgaaaataata 360
Query: 507 acggtaatagtagtaataatcaccatcagcatcacggcagaggtgagaaatcttatcagc 566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 acggtaatagtagtaataatcaccatcagcatcacggcagaggtgagaaatcttatcagc 420
Query: 567 atcaaaaccaactgcattcagcaactgattcaagaggttcatccagtaccgataccacgt 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atcaaaaccaactgcattcagcaactgattcaagaggttcatccagtaccgataccacgt 480
Query: 627 caactggcagcgatgtagttaatctttcaaattcaaaacattccactcaacagactaata 686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 caactggcagcgatgtagttaatctttcaaattcaaaacattccactcaacagactaata 540
Query: 687 ccatgaaatcagagaaacaaactgcattatttattggagatttaccaggtaacgtcactg 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ccatgaaatcagagaaacaaactgcattatttattggagatttaccaggtaacgtcactg 600
Query: 747 aagatatgttgcataatatatttaacaagttcaaatctttcaattcagtcaagatttgtg 806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aagatatgttgcataatatatttaacaagttcaaatctttcaattcagtcaagatttgtg 660
Query: 807 ttgattcgaataccaagaagtcattaggttatggctacttgaactttggcgatcccaaag 866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ttgattcgaataccaagaagtcattaggttatggctacttgaactttggcgatcccaaag 720
Query: 867 atgcagaaaatgcagttgatgagtataattacatgccgatctttggragagaaataagaa 926
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 721 atgcagaaaatgcagttgatgagtataattacatgccgatctttggaagagaaataagaa 780
Query: 927 tgatgccatcattgagagacacttatttcagaaag-acattggtacc-atgtgttcttt 983
||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 781 tgatgccatcattgagaaacacttatttcagaaagaacattggtaccaatgtgttcttt 839
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,630
Number of Sequences: 1807
Number of extensions: 10630
Number of successful extensions: 125
Number of sequences better than 1.0e-20: 1
length of query: 1057
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1041
effective length of database: 10,329,639
effective search space: 10753154199
effective search space used: 10753154199
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)